Prior script

http://www.cse.buffalo.edu/~juanli/Prior_Scripts.rar

norm script

Download:
1. norm_genes.m
2. example_genes.xls

norm_genes contains 3 parts:
1. read xls file
2. normlize data
3. generate input data for vbssm model.

Note:
1. 'example_genes.xls' is generated by extracting first 10 genes from 'E.coli.values.xls'--'no-inter' sheet.
2. There are 2 replicates timeseries , each of 8 timepoints
3. Data is already log-transformed

hns profiles after normalization

--From David------------------------
please could you post a figure of the profiles of gene hns after your normalization? this gene should have zero expression, which may mean that it should be constant and very low (negative) after normalization, rather than zero. we should check