Subset recovery for Shift -- Freqency Show

Numbers on the edges represent the number of models from 10 different random seeds
Download: pdf / .sif (with freqency on right)

Data: Shift network of vsn_normalization.xls
Setting: 10 seeds, k = 6 (optimum), mu = 0 (no prior incorporated)

Download: Script
Readme:
1. Run script to get the file containing hit log
Script to Run: "runS_subset_prior_freq.m"

Input:
S_yn.mat
S_inpn.mat
S_inpn.mat
prior_inter.mat

Dependencies:
find_arcs.m

Output:
hitlog/hit_subset


2. Analyze the hit log file
Script to Run : "analyze_hitlog_freq.m"

Input:
hitlog/hit_subset

Output:
freq_Prior_subset_Shift_vsn_top50reg.txt

Format:
from pd to mu= 0 .1 .5 1 2 4 8 12 16 32 64 100

cadB pd cadA 5 9 4 4 5 7 4 2 5 7 4 6

The number behind "cadB pd cadA" indicated this edge occurances among 10 different random seeds models, for different mu.