Cyto files for "top50" and "top50+regs" ---- vsn

Data: vsn-normalization.xls
Setting:
1. k = 6 % optimal k
2. seeds = [1:10] % get average CB+D matrix to generate network
3. sds = 3 % default CBDioZ threshold

top50 + reg : **Control ( .sif / .eda / .pdf ) **Shift ( .sif / .eda / .pdf )

top50: **Control ( .sif / .eda / .pdf ) **Shift ( .sif / .eda / .pdf )

Data.xls vs. vsn-normalization.xls

vsn: top50 + reg (Control + Shift) pdf

vsn: top50 (Control + Shift) pdf

Data.xls: top50 + reg (Control + Shift) pdf

Data.xls: top50 (Control + Shift) pdf

Data is normalized to produce these plots.

Hyper-para Derivation for VBSSM

The latest Latex file with comments is available at
http://www.cse.buffalo.edu/~juanli/hyper_update0302.rar

Code is available at
http://www.cse.buffalo.edu/~juanli/vbssm_v3.3.5.rar